y
Basic Information | |
---|---|
Species | Brachypodium distachyon |
Cazyme ID | Bradi4g07990.3 |
Family | GH35 |
Protein Properties | Length: 782 Molecular Weight: 86925.2 Isoelectric Point: 5.1587 |
Chromosome | Chromosome/Scaffold: 4 Start: 6924929 End: 6944160 |
Description | beta galactosidase 9 |
View CDS |
External Links |
---|
NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GH35 | 61 | 362 | 0 |
VGGERRMLVSAGVHYPRATPEMWPSIIAKCKEGGADVIETYIFWNGHEPAKGQYYFEERFDLVRFIKLVAAEGLFLFLRIGPYACAEWNFGGFPVWLRDI PGIEFRTDNEPYKAEMQTFVTKIVDMMKDEKLYSWQGGPIILQQIENEYGNIQGKYGQAGKRYMQWAAQMALGLDTGIPWVMCRQTDAPEQILDTCNAFY CDGFKPNSYNKPTIWTEDWDGWYADWGGPLPHRPAEDSAFAVARFYQRGGSLQNYYMYFGGTNFARTAGGPLQITSYDYDAPINEYGMLRQPKWGHLKDL HT |
Full Sequence |
---|
Protein Sequence Length: 782 Download |
MAASPSPSRF RPLLPLLVVV GACFAASASA AGQLREVVGK GTDGLFFEPF NVSYDHRAVR 60 VGGERRMLVS AGVHYPRATP EMWPSIIAKC KEGGADVIET YIFWNGHEPA KGQYYFEERF 120 DLVRFIKLVA AEGLFLFLRI GPYACAEWNF GGFPVWLRDI PGIEFRTDNE PYKAEMQTFV 180 TKIVDMMKDE KLYSWQGGPI ILQQIENEYG NIQGKYGQAG KRYMQWAAQM ALGLDTGIPW 240 VMCRQTDAPE QILDTCNAFY CDGFKPNSYN KPTIWTEDWD GWYADWGGPL PHRPAEDSAF 300 AVARFYQRGG SLQNYYMYFG GTNFARTAGG PLQITSYDYD APINEYGMLR QPKWGHLKDL 360 HTAIKLCEPA LIAVDGSPQY VKLGSMQEAH IYSSAKVHTN GSTAGNAQIC SAFLANIDEH 420 KYVSVWIFGK SYNLPPWSVS ILPDCENVAF NTARVGAQTS VFTFESGSPS HSSRREPSVL 480 LPGVRGSYLS STWWTSKETI GTWGDGSFAT QGILEHLNVT KDISDYLWYT TSVNISDEDV 540 AFWSSKGVLP SLIIDQIRDV ARVFVNGKLA GSQVGHWVSL KQPIQFVRGL NELTLLSEIV 600 GLQNYGAFLE KDGAGFKGQV KLTGLSNGDT DLTNSAWTYQ VGLKGEFSMI YTPEKQECAE 660 WSAMQTDNIQ SPFTWYKTMV DAPEGTDPVA IDLGSMGKGQ AWVNGRLIGR YWSLVAPESG 720 CPSSCNYPGA YSETKCQSNC GMPTQSWYHI PREWLQESNN LLVLFEETGG DPSKISLEWI 780 V* 840 |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02449 | Glyco_hydro_42 | 0.001 | 74 | 210 | 154 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. | ||
COG1874 | LacA | 2.0e-18 | 52 | 354 | 363 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
pfam01301 | Glyco_hydro_35 | 2.0e-147 | 63 | 364 | 317 | + Glycosyl hydrolases family 35. | ||
PLN03059 | PLN03059 | 0 | 51 | 777 | 733 | + beta-galactosidase; Provisional |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0004565 | beta-galactosidase activity |
GO:0005975 | carbohydrate metabolic process |
GO:0009341 | beta-galactosidase complex |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABA97655.2 | 0 | 46 | 685 | 58 | 704 | Beta-galactosidase precursor, putative, expressed [Oryza sativa (japonica cultivar-group)] |
GenBank | EAY82934.1 | 0 | 46 | 685 | 58 | 696 | hypothetical protein OsI_38151 [Oryza sativa Indica Group] |
GenBank | EEE53129.1 | 0 | 46 | 685 | 58 | 731 | hypothetical protein OsJ_35927 [Oryza sativa Japonica Group] |
RefSeq | NP_001066673.1 | 0 | 46 | 778 | 58 | 789 | Os12g0429200 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002442888.1 | 0 | 34 | 778 | 49 | 793 | hypothetical protein SORBIDRAFT_08g004410 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3d3a_A | 2e-39 | 61 | 360 | 17 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3d3a_A | 0.00003 | 527 | 778 | 385 | 582 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_D | 1e-38 | 50 | 360 | 9 | 330 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_C | 1e-38 | 50 | 360 | 9 | 330 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
Metabolic Pathways | |||
---|---|---|---|
Pathway Name | Reaction | EC | Protein Name |
lactose degradation III | BETAGALACTOSID-RXN | EC-3.2.1.23 | β-galactosidase |