y
Basic Information | |
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Species | Linum usitatissimum |
Cazyme ID | Lus10000701 |
Family | GH35 |
Protein Properties | Length: 845 Molecular Weight: 93588.4 Isoelectric Point: 6.9675 |
Chromosome | Chromosome/Scaffold: 504 Start: 22275 End: 28406 |
Description | beta galactosidase 1 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH35 | 39 | 341 | 0 |
VINGQRRILISGSIHYPRSTPEMWPDLIQKAQEGGLDVIQTYVFWNGHEPSPGQYYFEGNYDLVKFIKLVKEAGLYVHLRLGPYICAEWNFGGFPVWLKY IPGISFRTDNGPFKAEMQKFTTKIVNMMKAERLFETQGGPIILSQIENEYGPMEYELGEPGKAYTKWAADMAVDLGTGVPWIMCKQDDAPDPIINTCNGF YCDYFSPNKEYKPKMWTEAWTGWFTEFGGAVPYRPAEDMAFGVARFIQKGGSFINYYMYHGGTNFGRTAGGPFIATSYDYDAPLDEYGLLRQPKWGHLKD LHR |
Full Sequence |
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Protein Sequence Length: 845 Download |
MSTNTNNLFM LSFFLLGLCI CSSSPSVSAS VSYDSKAVVI NGQRRILISG SIHYPRSTPE 60 MWPDLIQKAQ EGGLDVIQTY VFWNGHEPSP GQYYFEGNYD LVKFIKLVKE AGLYVHLRLG 120 PYICAEWNFG GFPVWLKYIP GISFRTDNGP FKAEMQKFTT KIVNMMKAER LFETQGGPII 180 LSQIENEYGP MEYELGEPGK AYTKWAADMA VDLGTGVPWI MCKQDDAPDP IINTCNGFYC 240 DYFSPNKEYK PKMWTEAWTG WFTEFGGAVP YRPAEDMAFG VARFIQKGGS FINYYMYHGG 300 TNFGRTAGGP FIATSYDYDA PLDEYGLLRQ PKWGHLKDLH RAIKLCEPAL VLGDPTVTPL 360 GNYQEAHVFK SKSGSCAAFL ANYNPKSFAK VSFGSMHYNL PPWSISILPD CKNTVYNTAR 420 VGAQTSRMKM TPVPTHGGFS WQAYNEEPSA EGDKSFNMVG LLEQINTTRD ATDYLWYMTD 480 VNIGPGESSL YNGKYPVLNV LSAGHALHVF VNGQLVGTAY GSLEFPKLTF SQGVNLRAGI 540 NKIALLSIAV GLPNVGPHFE TWNAGVLGPV TLNGLDDGRW DLSWQKWTYK IGLKGEDMSL 600 HSLSGSSSVE WAEGSVVSER QPLMWYKTTF SAPAGNSPMA LDMGSMGKGQ VWINGQSVGR 660 YWPAYKAVGS CDECSYAGTY SEKKCLSNCG EASQRWYHVP RSWLKPTGNL LVVFEEWGGD 720 PNGISVVRRE VDSVCADIYE WQPTLMNYHM QASERVKKSL RPKVHLSCGP GQKMSTIKFA 780 SYGTPKGTCG NYQQGSCHAL HSYDAFNRLC VGQNWCSVTV APEMFGGDPC PDVMKKLAVE 840 AICS* 900 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02449 | Glyco_hydro_42 | 6.0e-7 | 53 | 189 | 152 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. | ||
pfam02140 | Gal_Lectin | 5.0e-21 | 766 | 843 | 82 | + Galactose binding lectin domain. | ||
COG1874 | LacA | 2.0e-22 | 40 | 333 | 345 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
pfam01301 | Glyco_hydro_35 | 3.0e-165 | 40 | 343 | 320 | + Glycosyl hydrolases family 35. | ||
PLN03059 | PLN03059 | 0 | 40 | 844 | 806 | + beta-galactosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0004565 | beta-galactosidase activity |
GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
GO:0005975 | carbohydrate metabolic process |
GO:0009341 | beta-galactosidase complex |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABK96254.1 | 0 | 26 | 844 | 28 | 846 | unknown [Populus trichocarpa x Populus deltoides] |
EMBL | CAC44500.1 | 0 | 21 | 844 | 20 | 843 | beta-galactosidase [Fragaria x ananassa] |
RefSeq | NP_187988.1 | 0 | 28 | 844 | 31 | 847 | BGAL1 (Beta galactosidase 1); beta-galactosidase/ catalytic/ cation binding / heme binding / peroxidase/ sugar binding [Arabidopsis thaliana] |
RefSeq | XP_002327432.1 | 0 | 26 | 844 | 21 | 839 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002527409.1 | 0 | 1 | 844 | 6 | 845 | beta-galactosidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3d3a_A | 0 | 39 | 339 | 16 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_D | 1.00053e-42 | 31 | 413 | 11 | 405 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_C | 1.00053e-42 | 31 | 413 | 11 | 405 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |