Genome Details
Selected Rep_genome_ID: SPMP06_bin.115
Total Genomes Found: 17
Total Genomes Found: 17
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Mediterraneibacter
Species
Mediterraneibacter torques
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| B127.bin_6 | 2,887,749 | 99.42% | 0% | China(Inner Mongolia) | Asia | IMGG |
| CGMR026814 | 2,435,796 | 99.42% | 0% | China | Asia | CGMR |
| Rep_2036 | 2,633,353 | 98.8304% | 0% | NA | NA | WIS |
| SPMP05_bin.10 | 2,654,311 | 98.83% | 0% | Singapore | Asia | SPMP |
| SPMP06_bin.115 | 2,868,943 | 99.88% | 0% | Singapore | Asia | SPMP |
| SPMP13_bin.11 | 2,593,691 | 94.83% | 0.58% | Singapore | Asia | SPMP |
| SPMP15_bin.4 | 2,450,455 | 97.08% | 0% | Singapore | Asia | SPMP |
| SPMP17_bin.71 | 2,657,742 | 96.35% | 1.07% | Singapore | Asia | SPMP |
| SPMP29_bin.82 | 2,600,143 | 98.25% | 0% | Singapore | Asia | SPMP |
| SPMP30_bin.102 | 2,749,425 | 99.12% | 0.29% | Singapore | Asia | SPMP |
| SPMP31_bin.185 | 2,761,919 | 98.16% | 0.38% | Singapore | Asia | SPMP |
| SPMP39_bin.2 | 2,584,858 | 98.83% | 0% | Singapore | Asia | SPMP |
| SPMP46_bin.61 | 2,438,331 | 95.66% | 0% | Singapore | Asia | SPMP |
| SPMP65_bin.1 | 2,732,208 | 97.66% | 0% | Singapore | Asia | SPMP |
| SPMP86_bin.52 | 2,449,585 | 94.03% | 0% | Singapore | Asia | SPMP |
| SPMP89_bin.41 | 2,602,948 | 95.66% | 0% | Singapore | Asia | SPMP |
| SW014_84_sub | 2,521,974 | 99.42% | 0% | NA | Africa | H3AfricaPhase2 |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| SPMP06_bin.115_CGC30 | CGCFAM_00027 | Yes | 5 | 1 | |
| SPMP06_bin.115_CGC1 | CGCFAM_00055 | Yes | 8 | 3 | |
| SPMP06_bin.115_CGC25 | CGCFAM_00242 | Yes | 10 | 1 | |
| SPMP06_bin.115_CGC18 | CGCFAM_00453 | Yes | 4 | 1 | |
| SPMP06_bin.115_CGC13 | CGCFAM_00728 | Yes | 5 | 2 | |
| SPMP06_bin.115_CGC26 | CGCFAM_00728 | Yes | 4 | 1 | |
| SPMP06_bin.115_CGC11 | CGCFAM_00833 | Yes | 6 | 1 | |
| SPMP06_bin.115_CGC22 | CGCFAM_01528 | Yes | 18 | 12 | |
| SPMP06_bin.115_CGC5 | CGCFAM_02616 | Yes | 5 | 1 | |
| SPMP06_bin.115_CGC32 | CGCFAM_03221 | Yes | 4 | 1 | |
| SPMP06_bin.115_CGC14 | CGCFAM_03894 | Yes | 7 | 1 | |
| SPMP06_bin.115_CGC3 | CGCFAM_04042 | Yes | 4 | 1 | |
| SPMP06_bin.115_CGC31 | CGCFAM_06184 | Yes | 6 | 1 | |
| SPMP06_bin.115_CGC10 | CGCFAM_08417 | Yes | 8 | 1 | |
| SPMP06_bin.115_CGC28 | CGCFAM_10039 | Yes | 5 | 2 | |
| SPMP06_bin.115_CGC33 | CGCFAM_10040 | Yes | 7 | 1 | |
| SPMP06_bin.115_CGC24 | CGCFAM_10041 | Yes | 6 | 1 |
Top CAZyme Families