Cluster: SPMP06_bin.115_CGC24
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: SPMP06_bin.115
- CGC Family ID: CGCFAM_10041
- Continent: Asia
- Source Study: Gounot et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | opera_contig_193823 | opera_contig_193823_47 | 50228 | 54517 | - | GH51_9 |
| pfam | opera_contig_193823 | opera_contig_193823_48 | 54869 | 55813 | - | Mem_trans |
| pfam | opera_contig_193823 | opera_contig_193823_49 | 55870 | 56037 | - | AAA_15 | AAA_23 |
| TC | opera_contig_193823 | opera_contig_193823_50 | 56142 | 59744 | - | 3.A.1.122.2 |
| pfam | opera_contig_193823 | opera_contig_193823_51 | 59955 | 60419 | - | SpoVAB |
| TC | opera_contig_193823 | opera_contig_193823_52 | 60403 | 61065 | - | 9.A.11.1.1 |
Gene ID: opera_contig_193823_47
Type: CAZyme
Location: 50228 - 54517 (-)
Type: CAZyme
Location: 50228 - 54517 (-)
Gene ID: opera_contig_193823_48
Type: pfam
Location: 54869 - 55813 (-)
Type: pfam
Location: 54869 - 55813 (-)
Gene ID: opera_contig_193823_49
Type: pfam
Location: 55870 - 56037 (-)
Type: pfam
Location: 55870 - 56037 (-)
Gene ID: opera_contig_193823_50
Type: TC
Location: 56142 - 59744 (-)
Type: TC
Location: 56142 - 59744 (-)
Gene ID: opera_contig_193823_51
Type: pfam
Location: 59955 - 60419 (-)
Type: pfam
Location: 59955 - 60419 (-)
Gene ID: opera_contig_193823_52
Type: TC
Location: 60403 - 61065 (-)
Type: TC
Location: 60403 - 61065 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Mediterraneibacter
Species
Mediterraneibacter torques
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.