Cluster: SPMP06_bin.115_CGC33
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: SPMP06_bin.115
- CGC Family ID: CGCFAM_10040
- Continent: Asia
- Source Study: Gounot et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | opera_contig_193825 | opera_contig_193825_133 | 159226 | 160671 | + | 2.A.38.1.1 |
| NULL(UNKNOWN) | opera_contig_193825 | opera_contig_193825_134 | 160715 | 162331 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| STP | opera_contig_193825 | opera_contig_193825_135 | 162417 | 162839 | - | ATPase_2 |
| TC | opera_contig_193825 | opera_contig_193825_136 | 163195 | 163977 | + | 2.A.5.5.2 |
| CAZyme | opera_contig_193825 | opera_contig_193825_137 | 163986 | 164771 | - | CE4 |
| pfam | opera_contig_193825 | opera_contig_193825_138 | 164902 | 165885 | + | 2-Hacid_dh | 2-Hacid_dh_C | NAD_binding_2 |
| TC | opera_contig_193825 | opera_contig_193825_139 | 165901 | 166797 | + | 3.A.1.132.6 |
Gene ID: opera_contig_193825_133
Type: TC
Location: 159226 - 160671 (+)
Type: TC
Location: 159226 - 160671 (+)
Gene ID: opera_contig_193825_134
Type:
Location: 160715 - 162331 (+)
Type:
Location: 160715 - 162331 (+)
Gene ID: opera_contig_193825_135
Type: STP
Location: 162417 - 162839 (-)
Type: STP
Location: 162417 - 162839 (-)
Gene ID: opera_contig_193825_136
Type: TC
Location: 163195 - 163977 (+)
Type: TC
Location: 163195 - 163977 (+)
Gene ID: opera_contig_193825_137
Type: CAZyme
Location: 163986 - 164771 (-)
Type: CAZyme
Location: 163986 - 164771 (-)
Gene ID: opera_contig_193825_138
Type: pfam
Location: 164902 - 165885 (+)
Type: pfam
Location: 164902 - 165885 (+)
Gene ID: opera_contig_193825_139
Type: TC
Location: 165901 - 166797 (+)
Type: TC
Location: 165901 - 166797 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Mediterraneibacter
Species
Mediterraneibacter torques
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.