Cluster: SPMP06_bin.115_CGC5
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: SPMP06_bin.115
- CGC Family ID: CGCFAM_02616
- Continent: Asia
- Source Study: Gounot et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | opera_contig_193820 | opera_contig_193820_239 | 262194 | 263312 | + | GH109 |
| TC | opera_contig_193820 | opera_contig_193820_240 | 263331 | 264830 | + | 3.A.1.2.20 |
| TC | opera_contig_193820 | opera_contig_193820_241 | 264827 | 265786 | + | 3.A.1.2.15 |
| pfam | opera_contig_193820 | opera_contig_193820_242 | 265917 | 267209 | + | DEDD_Tnp_IS110 | Transposase_20 |
| TC | opera_contig_193820 | opera_contig_193820_243 | 267678 | 268652 | + | 3.A.1.2.13 |
Gene ID: opera_contig_193820_239
Type: CAZyme
Location: 262194 - 263312 (+)
Type: CAZyme
Location: 262194 - 263312 (+)
Gene ID: opera_contig_193820_240
Type: TC
Location: 263331 - 264830 (+)
Type: TC
Location: 263331 - 264830 (+)
Gene ID: opera_contig_193820_241
Type: TC
Location: 264827 - 265786 (+)
Type: TC
Location: 264827 - 265786 (+)
Gene ID: opera_contig_193820_242
Type: pfam
Location: 265917 - 267209 (+)
Type: pfam
Location: 265917 - 267209 (+)
Gene ID: opera_contig_193820_243
Type: TC
Location: 267678 - 268652 (+)
Type: TC
Location: 267678 - 268652 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Mediterraneibacter
Species
Mediterraneibacter torques
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.