Cluster: SPMP06_bin.115_CGC28
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: SPMP06_bin.115
- CGC Family ID: CGCFAM_10039
- Continent: Asia
- Source Study: Gounot et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | opera_contig_193823 | opera_contig_193823_226 | 271066 | 273201 | - | 3.D.10.1.4 |
| pfam | opera_contig_193823 | opera_contig_193823_227 | 273269 | 274231 | - | NadA |
| CAZyme | opera_contig_193823 | opera_contig_193823_228 | 274858 | 279675 | - | GH84 |
| NULL(UNKNOWN) | opera_contig_193823 | opera_contig_193823_229 | 279917 | 280303 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | opera_contig_193823 | opera_contig_193823_230 | 280606 | 285777 | - | CBM32 | GH36 |
Gene ID: opera_contig_193823_226
Type: TC
Location: 271066 - 273201 (-)
Type: TC
Location: 271066 - 273201 (-)
Gene ID: opera_contig_193823_227
Type: pfam
Location: 273269 - 274231 (-)
Type: pfam
Location: 273269 - 274231 (-)
Gene ID: opera_contig_193823_228
Type: CAZyme
Location: 274858 - 279675 (-)
Type: CAZyme
Location: 274858 - 279675 (-)
Gene ID: opera_contig_193823_229
Type:
Location: 279917 - 280303 (-)
Type:
Location: 279917 - 280303 (-)
Gene ID: opera_contig_193823_230
Type: CAZyme
Location: 280606 - 285777 (-)
Type: CAZyme
Location: 280606 - 285777 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Mediterraneibacter
Species
Mediterraneibacter torques
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.