Cluster: SPMP06_bin.115_CGC11
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: SPMP06_bin.115
- CGC Family ID: CGCFAM_00833
- Continent: Asia
- Source Study: Gounot et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | opera_contig_193821 | opera_contig_193821_309 | 348625 | 350391 | + | 3.A.2.3.2 |
| TC | opera_contig_193821 | opera_contig_193821_310 | 350392 | 351762 | + | 3.A.2.2.2 |
| TC | opera_contig_193821 | opera_contig_193821_311 | 351874 | 352572 | + | 3.A.2.2.2 |
| NULL(UNKNOWN) | opera_contig_193821 | opera_contig_193821_312 | 352954 | 353877 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | opera_contig_193821 | opera_contig_193821_313 | 354309 | 355262 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | opera_contig_193821 | opera_contig_193821_314 | 355571 | 361879 | + | GH31_18 |
Gene ID: opera_contig_193821_309
Type: TC
Location: 348625 - 350391 (+)
Type: TC
Location: 348625 - 350391 (+)
Gene ID: opera_contig_193821_310
Type: TC
Location: 350392 - 351762 (+)
Type: TC
Location: 350392 - 351762 (+)
Gene ID: opera_contig_193821_311
Type: TC
Location: 351874 - 352572 (+)
Type: TC
Location: 351874 - 352572 (+)
Gene ID: opera_contig_193821_312
Type:
Location: 352954 - 353877 (+)
Type:
Location: 352954 - 353877 (+)
Gene ID: opera_contig_193821_313
Type:
Location: 354309 - 355262 (+)
Type:
Location: 354309 - 355262 (+)
Gene ID: opera_contig_193821_314
Type: CAZyme
Location: 355571 - 361879 (+)
Type: CAZyme
Location: 355571 - 361879 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Mediterraneibacter
Species
Mediterraneibacter torques
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.