Cluster: SPMP06_bin.115_CGC31
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: SPMP06_bin.115
- CGC Family ID: CGCFAM_06184
- Continent: Asia
- Source Study: Gounot et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | opera_contig_193824 | opera_contig_193824_59 | 53974 | 54729 | - | 3.A.1.7.5 |
| TC | opera_contig_193824 | opera_contig_193824_60 | 54835 | 55377 | - | 3.A.1.7.5 |
| TC | opera_contig_193824 | opera_contig_193824_61 | 55402 | 56262 | - | 3.A.1.7.5 |
| TC | opera_contig_193824 | opera_contig_193824_62 | 56255 | 57148 | - | 3.A.1.7.5 |
| STP | opera_contig_193824 | opera_contig_193824_63 | 57207 | 58130 | - | LysR_substrate |
| CAZyme | opera_contig_193824 | opera_contig_193824_64 | 59012 | 60100 | - | GH1 |
Gene ID: opera_contig_193824_59
Type: TC
Location: 53974 - 54729 (-)
Type: TC
Location: 53974 - 54729 (-)
Gene ID: opera_contig_193824_60
Type: TC
Location: 54835 - 55377 (-)
Type: TC
Location: 54835 - 55377 (-)
Gene ID: opera_contig_193824_61
Type: TC
Location: 55402 - 56262 (-)
Type: TC
Location: 55402 - 56262 (-)
Gene ID: opera_contig_193824_62
Type: TC
Location: 56255 - 57148 (-)
Type: TC
Location: 56255 - 57148 (-)
Gene ID: opera_contig_193824_63
Type: STP
Location: 57207 - 58130 (-)
Type: STP
Location: 57207 - 58130 (-)
Gene ID: opera_contig_193824_64
Type: CAZyme
Location: 59012 - 60100 (-)
Type: CAZyme
Location: 59012 - 60100 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Mediterraneibacter
Species
Mediterraneibacter torques
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.