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Cluster: SPMP06_bin.115_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC opera_contig_193821 opera_contig_193821_250 287091 288479 - 2.A.66.1.32
TF opera_contig_193821 opera_contig_193821_251 288608 289138 + PadR
TC opera_contig_193821 opera_contig_193821_252 289261 289947 + 3.A.1.122.14
pfam opera_contig_193821 opera_contig_193821_253 289937 292498 + FtsX | FtsX
TF opera_contig_193821 opera_contig_193821_254 292566 293246 + Trans_reg_C
TC opera_contig_193821 opera_contig_193821_255 293249 294274 + 2.A.21.9.2
TC opera_contig_193821 opera_contig_193821_256 294369 294725 + 4.A.1.1.15
CAZyme opera_contig_193821 opera_contig_193821_257 294738 296390 + GH13_29
Gene ID: opera_contig_193821_250
Type: TC
Location: 287091 - 288479 (-)
Gene ID: opera_contig_193821_251
Type: TF
Location: 288608 - 289138 (+)
Gene ID: opera_contig_193821_252
Type: TC
Location: 289261 - 289947 (+)
Gene ID: opera_contig_193821_253
Type: pfam
Location: 289937 - 292498 (+)
Gene ID: opera_contig_193821_254
Type: TF
Location: 292566 - 293246 (+)
Gene ID: opera_contig_193821_255
Type: TC
Location: 293249 - 294274 (+)
Gene ID: opera_contig_193821_256
Type: TC
Location: 294369 - 294725 (+)
Gene ID: opera_contig_193821_257
Type: CAZyme
Location: 294738 - 296390 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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