Cluster: SPMP06_bin.115_CGC30
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: SPMP06_bin.115
- CGC Family ID: CGCFAM_00027
- Continent: Asia
- Source Study: Gounot et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | opera_contig_193823 | opera_contig_193823_316 | 418847 | 420307 | - | 3.A.1.121.3 |
| pfam | opera_contig_193823 | opera_contig_193823_317 | 420775 | 421353 | - | DUF4143 |
| CAZyme | opera_contig_193823 | opera_contig_193823_318 | 421708 | 423186 | - | GH1 |
| TC | opera_contig_193823 | opera_contig_193823_319 | 423226 | 423708 | - | 4.A.1.1.1 |
| TC | opera_contig_193823 | opera_contig_193823_320 | 423710 | 425098 | - | 4.A.1.2.11 |
Gene ID: opera_contig_193823_316
Type: TC
Location: 418847 - 420307 (-)
Type: TC
Location: 418847 - 420307 (-)
Gene ID: opera_contig_193823_317
Type: pfam
Location: 420775 - 421353 (-)
Type: pfam
Location: 420775 - 421353 (-)
Gene ID: opera_contig_193823_318
Type: CAZyme
Location: 421708 - 423186 (-)
Type: CAZyme
Location: 421708 - 423186 (-)
Gene ID: opera_contig_193823_319
Type: TC
Location: 423226 - 423708 (-)
Type: TC
Location: 423226 - 423708 (-)
Gene ID: opera_contig_193823_320
Type: TC
Location: 423710 - 425098 (-)
Type: TC
Location: 423710 - 425098 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Mediterraneibacter
Species
Mediterraneibacter torques
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.