dbCAN Logo

Genome Details

Selected Rep_genome_ID: Rep_453
Total Genomes Found: 1
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Bacteroidaceae
→
Genus
Phocaeicola
→
Genomes Table
Genome ID Genome Length Completeness Contamination Country Continent Source
Rep_453 6,137,899 97.3606% 0.27881% NA NA WIS
Analysis Charts
CGCs
Gene Cluster ID Family Name In Labeled Family Gene Count CAZyme Count Substrate
Rep_453_CGC2 CGCFAM_00001 Yes 6 4 pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
Rep_453_CGC50 CGCFAM_00001 Yes 4 1 pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
Rep_453_CGC59 CGCFAM_00001 Yes 7 2 pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
Rep_453_CGC14 CGCFAM_00002 Yes 9 5
Rep_453_CGC24 CGCFAM_00017 Yes 12 3 fructan
Rep_453_CGC74 CGCFAM_00018 Yes 7 2
Rep_453_CGC26 CGCFAM_00023 Yes 3 1
Rep_453_CGC33 CGCFAM_00023 Yes 10 3
Rep_453_CGC7 CGCFAM_00025 Yes 10 3 pectin/alpha-glucan
Rep_453_CGC58 CGCFAM_00030 Yes 3 1
Rep_453_CGC36 CGCFAM_00040 Yes 4 3
Rep_453_CGC56 CGCFAM_00048 Yes 12 2
Rep_453_CGC62 CGCFAM_00108 Yes 11 5 pectin
Rep_453_CGC65 CGCFAM_00110 Yes 6 3 pectin/host glycan
Rep_453_CGC86 CGCFAM_00111 Yes 5 1 alpha-glucan
Rep_453_CGC87 CGCFAM_00111 Yes 4 1 alpha-glucan
Rep_453_CGC84 CGCFAM_00129 Yes 6 4 beta-mannan
Rep_453_CGC11 CGCFAM_00136 Yes 11 4 pectin
Rep_453_CGC44 CGCFAM_00164 Yes 6 1
PUL0092_Rep_453_C3 CGCFAM_00194 Yes 8 5 host glycan
Rep_453_CGC4 CGCFAM_00194 Yes 10 6 host glycan
Rep_453_CGC12 CGCFAM_00229 Yes 4 1
Rep_453_CGC22 CGCFAM_00296 Yes 6 3
Rep_453_CGC20 CGCFAM_00306 Yes 5 2
Rep_453_CGC48 CGCFAM_00365 Yes 5 2 host glycan
Top CAZyme Families