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Cluster: Rep_453_CGC33

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_453_c_171 Rep_453_c_171_2 1076 1552 - 3.D.1.5.1
TC Rep_453_c_171 Rep_453_c_171_3 1574 3340 - 3.D.1.6.1
TC Rep_453_c_171 Rep_453_c_171_4 3436 5343 - 3.D.1.5.1
sulfatase Rep_453_c_171 Rep_453_c_171_5 5431 7026 - S1_4
CAZyme Rep_453_c_171 Rep_453_c_171_6 7213 9894 - GH2
NULL(UNKNOWN) Rep_453_c_171 Rep_453_c_171_7 9839 9955 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_453_c_171 Rep_453_c_171_8 9928 11994 - GH20
CAZyme Rep_453_c_171 Rep_453_c_171_9 11991 14438 - GH2
TC Rep_453_c_171 Rep_453_c_171_10 14539 16080 - 8.A.46.1.3
TC Rep_453_c_171 Rep_453_c_171_11 16093 19449 - 1.B.14.6.1
Gene ID: Rep_453_c_171_2
Type: TC
Location: 1076 - 1552 (-)
Gene ID: Rep_453_c_171_3
Type: TC
Location: 1574 - 3340 (-)
Gene ID: Rep_453_c_171_4
Type: TC
Location: 3436 - 5343 (-)
Gene ID: Rep_453_c_171_5
Type: sulfatase
Location: 5431 - 7026 (-)
Gene ID: Rep_453_c_171_6
Type: CAZyme
Location: 7213 - 9894 (-)
Gene ID: Rep_453_c_171_7
Type:
Location: 9839 - 9955 (-)
Gene ID: Rep_453_c_171_8
Type: CAZyme
Location: 9928 - 11994 (-)
Gene ID: Rep_453_c_171_9
Type: CAZyme
Location: 11991 - 14438 (-)
Gene ID: Rep_453_c_171_10
Type: TC
Location: 14539 - 16080 (-)
Gene ID: Rep_453_c_171_11
Type: TC
Location: 16093 - 19449 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Bacteroidaceae
→
Genus
Phocaeicola
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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