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Cluster: Rep_453_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_453_c_70 Rep_453_c_70_4 1257 2009 - GT2
STP Rep_453_c_70 Rep_453_c_70_5 2022 3485 - B12-binding
CAZyme Rep_453_c_70 Rep_453_c_70_6 3492 4205 - GT2
CAZyme Rep_453_c_70 Rep_453_c_70_7 4216 5292 - GT4
pfam Rep_453_c_70 Rep_453_c_70_8 5308 6411 - EpsG
CAZyme Rep_453_c_70 Rep_453_c_70_9 6464 7726 - GT2
NULL(UNKNOWN) Rep_453_c_70 Rep_453_c_70_10 8049 8279 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_453_c_70 Rep_453_c_70_11 8257 9243 - GT2
TC Rep_453_c_70 Rep_453_c_70_12 9252 10697 - 2.A.66.10.1
Gene ID: Rep_453_c_70_4
Type: CAZyme
Location: 1257 - 2009 (-)
Gene ID: Rep_453_c_70_5
Type: STP
Location: 2022 - 3485 (-)
Gene ID: Rep_453_c_70_6
Type: CAZyme
Location: 3492 - 4205 (-)
Gene ID: Rep_453_c_70_7
Type: CAZyme
Location: 4216 - 5292 (-)
Gene ID: Rep_453_c_70_8
Type: pfam
Location: 5308 - 6411 (-)
Gene ID: Rep_453_c_70_9
Type: CAZyme
Location: 6464 - 7726 (-)
Gene ID: Rep_453_c_70_10
Type:
Location: 8049 - 8279 (+)
Gene ID: Rep_453_c_70_11
Type: CAZyme
Location: 8257 - 9243 (-)
Gene ID: Rep_453_c_70_12
Type: TC
Location: 9252 - 10697 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Bacteroidaceae
→
Genus
Phocaeicola
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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