Genome Details
Selected Rep_genome_ID: Rep_1001
Total Genomes Found: 1
Total Genomes Found: 1
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Pantoea
Species
Pantoea ananatis
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| Rep_1001 | 4,793,768 | 99.978% | 0.137514% | NA | NA | WIS |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| PUL0605_Rep_1001_C37 | CGCFAM_00004 | Yes | 4 | 3 | alpha-glucan |
| Rep_1001_CGC24 | CGCFAM_00015 | Yes | 6 | 4 | |
| Rep_1001_CGC4 | CGCFAM_00042 | Yes | 6 | 1 | beta-glucan |
| Rep_1001_CGC25 | CGCFAM_00060 | Yes | 17 | 4 | |
| Rep_1001_CGC12 | CGCFAM_00123 | Yes | 14 | 6 | |
| Rep_1001_CGC41 | CGCFAM_00144 | Yes | 9 | 3 | |
| Rep_1001_CGC2 | CGCFAM_00205 | Yes | 6 | 1 | |
| Rep_1001_CGC38 | CGCFAM_00261 | Yes | 4 | 1 | |
| Rep_1001_CGC27 | CGCFAM_00293 | Yes | 7 | 1 | |
| Rep_1001_CGC22 | CGCFAM_00487 | Yes | 14 | 2 | |
| Rep_1001_CGC48 | CGCFAM_00626 | Yes | 12 | 1 | |
| Rep_1001_CGC8 | CGCFAM_01760 | Yes | 4 | 1 | |
| Rep_1001_CGC31 | CGCFAM_02023 | Yes | 3 | 1 | |
| Rep_1001_CGC1 | CGCFAM_02218 | Yes | 11 | 1 | |
| Rep_1001_CGC3 | CGCFAM_02219 | Yes | 4 | 1 | |
| Rep_1001_CGC35 | CGCFAM_02815 | Yes | 5 | 1 | |
| Rep_1001_CGC32 | CGCFAM_02885 | Yes | 27 | 2 | |
| Rep_1001_CGC36 | CGCFAM_03309 | Yes | 5 | 1 | |
| Rep_1001_CGC44 | CGCFAM_05270 | Yes | 9 | 1 | |
| Rep_1001_CGC40 | CGCFAM_07212 | Yes | 4 | 2 | |
| Rep_1001_CGC30 | CGCFAM_09875 | Yes | 9 | 1 |
Top CAZyme Families