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Cluster: Rep_1001_CGC30

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_1001_c_24 Rep_1001_c_24_126 131070 132746 - 1.B.52.2.1
TC Rep_1001_c_24 Rep_1001_c_24_127 132858 134420 - 1.B.52.2.1
STP Rep_1001_c_24 Rep_1001_c_24_128 134689 135186 - CheW
STP Rep_1001_c_24 Rep_1001_c_24_129 135210 137210 - CheW | CheY-binding | H-kinase_dim | HATPase_c
TC Rep_1001_c_24 Rep_1001_c_24_130 137216 138490 - 1.A.30.1.1
TC Rep_1001_c_24 Rep_1001_c_24_131 138487 139374 - 1.A.30.1.1
TF Rep_1001_c_24 Rep_1001_c_24_132 139505 140083 - FlhC
TF Rep_1001_c_24 Rep_1001_c_24_133 140083 140433 - FlhD
CAZyme Rep_1001_c_24 Rep_1001_c_24_134 141426 142862 - GT20
Gene ID: Rep_1001_c_24_126
Type: TC
Location: 131070 - 132746 (-)
Gene ID: Rep_1001_c_24_127
Type: TC
Location: 132858 - 134420 (-)
Gene ID: Rep_1001_c_24_128
Type: STP
Location: 134689 - 135186 (-)
Gene ID: Rep_1001_c_24_129
Type: STP
Location: 135210 - 137210 (-)
Gene ID: Rep_1001_c_24_130
Type: TC
Location: 137216 - 138490 (-)
Gene ID: Rep_1001_c_24_131
Type: TC
Location: 138487 - 139374 (-)
Gene ID: Rep_1001_c_24_132
Type: TF
Location: 139505 - 140083 (-)
Gene ID: Rep_1001_c_24_133
Type: TF
Location: 140083 - 140433 (-)
Gene ID: Rep_1001_c_24_134
Type: CAZyme
Location: 141426 - 142862 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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