dbCAN Logo

Cluster: Rep_1001_CGC25

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_1001_c_23 Rep_1001_c_23_146 164633 165709 - 9.B.146.1.7
pfam Rep_1001_c_23 Rep_1001_c_23_147 166220 167233 - adh_short | 3Beta_HSD | Epimerase | Polysacc_synt_2 | RmlD_sub_bind | NmrA | NAD_binding_4 | KR | NAD_binding_10 | GDP_Man_Dehyd
pfam Rep_1001_c_23 Rep_1001_c_23_148 167279 168175 - NTP_transferase
TC Rep_1001_c_23 Rep_1001_c_23_149 168443 169783 - 2.A.66.2.8
CAZyme Rep_1001_c_23 Rep_1001_c_23_150 169780 171003 - GT4
pfam Rep_1001_c_23 Rep_1001_c_23_151 171008 172270 - PS_pyruv_trans
pfam Rep_1001_c_23 Rep_1001_c_23_152 172421 174631 - Head_binding
CAZyme Rep_1001_c_23 Rep_1001_c_23_153 174718 175752 - GT4
CAZyme Rep_1001_c_23 Rep_1001_c_23_154 175798 176550 - GT2
CAZyme Rep_1001_c_23 Rep_1001_c_23_155 176632 177549 - GT2
pfam Rep_1001_c_23 Rep_1001_c_23_156 177679 178815 - EpsG
TC Rep_1001_c_23 Rep_1001_c_23_157 179071 181248 - 8.A.3.3.2
pfam Rep_1001_c_23 Rep_1001_c_23_158 181261 181695 - LMWPc
TC Rep_1001_c_23 Rep_1001_c_23_159 181705 182844 - 1.B.18.3.1
TC Rep_1001_c_23 Rep_1001_c_23_160 183118 184551 - 9.B.18.1.2
TC Rep_1001_c_23 Rep_1001_c_23_161 185329 186906 + 2.A.109.2.3
TC Rep_1001_c_23 Rep_1001_c_23_162 186903 188726 - 9.B.22.2.1
Gene ID: Rep_1001_c_23_146
Type: TC
Location: 164633 - 165709 (-)
Gene ID: Rep_1001_c_23_147
Type: pfam
Location: 166220 - 167233 (-)
Gene ID: Rep_1001_c_23_148
Type: pfam
Location: 167279 - 168175 (-)
Gene ID: Rep_1001_c_23_149
Type: TC
Location: 168443 - 169783 (-)
Gene ID: Rep_1001_c_23_150
Type: CAZyme
Location: 169780 - 171003 (-)
Gene ID: Rep_1001_c_23_151
Type: pfam
Location: 171008 - 172270 (-)
Gene ID: Rep_1001_c_23_152
Type: pfam
Location: 172421 - 174631 (-)
Gene ID: Rep_1001_c_23_153
Type: CAZyme
Location: 174718 - 175752 (-)
Gene ID: Rep_1001_c_23_154
Type: CAZyme
Location: 175798 - 176550 (-)
Gene ID: Rep_1001_c_23_155
Type: CAZyme
Location: 176632 - 177549 (-)
Gene ID: Rep_1001_c_23_156
Type: pfam
Location: 177679 - 178815 (-)
Gene ID: Rep_1001_c_23_157
Type: TC
Location: 179071 - 181248 (-)
Gene ID: Rep_1001_c_23_158
Type: pfam
Location: 181261 - 181695 (-)
Gene ID: Rep_1001_c_23_159
Type: TC
Location: 181705 - 182844 (-)
Gene ID: Rep_1001_c_23_160
Type: TC
Location: 183118 - 184551 (-)
Gene ID: Rep_1001_c_23_161
Type: TC
Location: 185329 - 186906 (+)
Gene ID: Rep_1001_c_23_162
Type: TC
Location: 186903 - 188726 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List