Genome Details
Selected Rep_genome_ID: HRGMv2_4563
Total Genomes Found: 1
Total Genomes Found: 1
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Gemmiger
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| HRGMv2_4563 | 2,792,293 | 91.4% | 1.53% | Malaysia | Asia | HRGM |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_4563_CGC11 | CGCFAM_00055 | Yes | 6 | 3 | |
| HRGMv2_4563_CGC16 | CGCFAM_00113 | Yes | 4 | 1 | |
| HRGMv2_4563_CGC3 | CGCFAM_00122 | Yes | 10 | 5 | |
| HRGMv2_4563_CGC32 | CGCFAM_00235 | Yes | 7 | 2 | |
| HRGMv2_4563_CGC1 | CGCFAM_00345 | Yes | 7 | 2 | |
| HRGMv2_4563_CGC22 | CGCFAM_00736 | Yes | 11 | 3 | |
| HRGMv2_4563_CGC15 | CGCFAM_00950 | Yes | 4 | 1 | |
| HRGMv2_4563_CGC6 | CGCFAM_03004 | Yes | 7 | 3 | |
| HRGMv2_4563_CGC21 | CGCFAM_04110 | Yes | 5 | 2 | |
| HRGMv2_4563_CGC18 | CGCFAM_06663 | Yes | 5 | 3 | |
| HRGMv2_4563_CGC12 | CGCFAM_06771 | Yes | 16 | 5 |
Top CAZyme Families