Genome Details
Selected Rep_genome_ID: HRGMv2_2994
Total Genomes Found: 3
Total Genomes Found: 3
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
CAG-115
Species
CAG-115 sp000432175
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| AG161_7 | 3,093,460 | 97.99% | 0.67% | NA | Africa | H3AfricaPhase2 |
| HRGMv2_2994 | 2,809,116 | 95.97% | 0% | Tanzania | Africa | HRGM |
| MGYG000002056 | 2,653,439 | 97.99% | 0.67% | China | Asia | UHGG |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_2994_CGC1 | CGCFAM_00002 | Yes | 3 | 2 | |
| HRGMv2_2994_CGC14 | CGCFAM_00067 | Yes | 7 | 3 | galactan |
| HRGMv2_2994_CGC25 | CGCFAM_00083 | Yes | 4 | 2 | beta-glucan |
| HRGMv2_2994_CGC19 | CGCFAM_00172 | Yes | 3 | 1 | |
| HRGMv2_2994_CGC13 | CGCFAM_00215 | Yes | 13 | 4 | alpha-glucan |
| HRGMv2_2994_CGC21 | CGCFAM_00319 | Yes | 4 | 1 | |
| HRGMv2_2994_CGC23 | CGCFAM_01096 | Yes | 3 | 1 | |
| HRGMv2_2994_CGC26 | CGCFAM_01945 | Yes | 4 | 2 | |
| HRGMv2_2994_CGC27 | CGCFAM_03488 | Yes | 6 | 1 | |
| HRGMv2_2994_CGC4 | CGCFAM_07608 | Yes | 5 | 2 | |
| HRGMv2_2994_CGC7 | CGCFAM_10276 | Yes | 4 | 1 |
Top CAZyme Families