Cluster: HRGMv2_2994_CGC19
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2994
- CGC Family ID: CGCFAM_00172
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2994_62 | HRGMv2_2994_62_1 | 379 | 1176 | + | 3.A.1.134.4 |
| TC | HRGMv2_2994_62 | HRGMv2_2994_62_2 | 1173 | 3167 | + | 3.A.1.134.4 |
| CAZyme | HRGMv2_2994_62 | HRGMv2_2994_62_3 | 3186 | 3878 | + | GT51 |
Gene ID: HRGMv2_2994_62_1
Type: TC
Location: 379 - 1176 (+)
Type: TC
Location: 379 - 1176 (+)
Gene ID: HRGMv2_2994_62_2
Type: TC
Location: 1173 - 3167 (+)
Type: TC
Location: 1173 - 3167 (+)
Gene ID: HRGMv2_2994_62_3
Type: CAZyme
Location: 3186 - 3878 (+)
Type: CAZyme
Location: 3186 - 3878 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
CAG-115
Species
CAG-115 sp000432175
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2994_62_1 | vegetarian > vegan | 1.90827 | 0.00226 |