Cluster: HRGMv2_2994_CGC26
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2994
- CGC Family ID: CGCFAM_01945
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2994_91 | HRGMv2_2994_91_8 | 6781 | 7794 | - | 9.A.11.1.1 |
| TC | HRGMv2_2994_91 | HRGMv2_2994_91_9 | 7806 | 8255 | - | 9.A.11.1.1 |
| CAZyme | HRGMv2_2994_91 | HRGMv2_2994_91_10 | 8467 | 9690 | + | GH5_4 |
| CAZyme | HRGMv2_2994_91 | HRGMv2_2994_91_11 | 9702 | 10847 | + | GH5_4 |
Gene ID: HRGMv2_2994_91_8
Type: TC
Location: 6781 - 7794 (-)
Type: TC
Location: 6781 - 7794 (-)
Gene ID: HRGMv2_2994_91_9
Type: TC
Location: 7806 - 8255 (-)
Type: TC
Location: 7806 - 8255 (-)
Gene ID: HRGMv2_2994_91_10
Type: CAZyme
Location: 8467 - 9690 (+)
Type: CAZyme
Location: 8467 - 9690 (+)
Gene ID: HRGMv2_2994_91_11
Type: CAZyme
Location: 9702 - 10847 (+)
Type: CAZyme
Location: 9702 - 10847 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
CAG-115
Species
CAG-115 sp000432175
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.