Cluster: HRGMv2_2994_CGC27
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2994
- CGC Family ID: CGCFAM_03488
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2994_105 | HRGMv2_2994_105_2 | 1024 | 2370 | - | 2.A.66.1.33 |
| NULL(UNKNOWN) | HRGMv2_2994_105 | HRGMv2_2994_105_3 | 2449 | 2964 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_2994_105 | HRGMv2_2994_105_4 | 3042 | 3917 | - | 3.A.1.1.18 |
| TC | HRGMv2_2994_105 | HRGMv2_2994_105_5 | 3921 | 4850 | - | 3.A.1.1.28 |
| STP | HRGMv2_2994_105 | HRGMv2_2994_105_6 | 4978 | 6408 | - | SBP_bac_1 |
| CAZyme | HRGMv2_2994_105 | HRGMv2_2994_105_7 | 6749 | 8788 | - | GH2 |
Gene ID: HRGMv2_2994_105_2
Type: TC
Location: 1024 - 2370 (-)
Type: TC
Location: 1024 - 2370 (-)
Gene ID: HRGMv2_2994_105_3
Type:
Location: 2449 - 2964 (+)
Type:
Location: 2449 - 2964 (+)
Gene ID: HRGMv2_2994_105_4
Type: TC
Location: 3042 - 3917 (-)
Type: TC
Location: 3042 - 3917 (-)
Gene ID: HRGMv2_2994_105_5
Type: TC
Location: 3921 - 4850 (-)
Type: TC
Location: 3921 - 4850 (-)
Gene ID: HRGMv2_2994_105_6
Type: STP
Location: 4978 - 6408 (-)
Type: STP
Location: 4978 - 6408 (-)
Gene ID: HRGMv2_2994_105_7
Type: CAZyme
Location: 6749 - 8788 (-)
Type: CAZyme
Location: 6749 - 8788 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
CAG-115
Species
CAG-115 sp000432175
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.