Cluster: HRGMv2_2994_CGC4
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2994
- CGC Family ID: CGCFAM_07608
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2994_7 | HRGMv2_2994_7_15 | 10596 | 11828 | - | GH3 |
| TC | HRGMv2_2994_7 | HRGMv2_2994_7_16 | 12171 | 16061 | + | 9.B.18.1.3 |
| pfam | HRGMv2_2994_7 | HRGMv2_2994_7_17 | 16048 | 16839 | + | PHP |
| pfam | HRGMv2_2994_7 | HRGMv2_2994_7_18 | 17260 | 17778 | + | Ribosomal_S30AE | Ribosom_S30AE_C |
| CAZyme | HRGMv2_2994_7 | HRGMv2_2994_7_19 | 18008 | 20401 | + | GH94 |
Gene ID: HRGMv2_2994_7_15
Type: CAZyme
Location: 10596 - 11828 (-)
Type: CAZyme
Location: 10596 - 11828 (-)
Gene ID: HRGMv2_2994_7_16
Type: TC
Location: 12171 - 16061 (+)
Type: TC
Location: 12171 - 16061 (+)
Gene ID: HRGMv2_2994_7_17
Type: pfam
Location: 16048 - 16839 (+)
Type: pfam
Location: 16048 - 16839 (+)
Gene ID: HRGMv2_2994_7_18
Type: pfam
Location: 17260 - 17778 (+)
Type: pfam
Location: 17260 - 17778 (+)
Gene ID: HRGMv2_2994_7_19
Type: CAZyme
Location: 18008 - 20401 (+)
Type: CAZyme
Location: 18008 - 20401 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
CAG-115
Species
CAG-115 sp000432175
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.