Cluster: HRGMv2_2994_CGC21
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2994
- CGC Family ID: CGCFAM_00319
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2994_68 | HRGMv2_2994_68_2 | 2291 | 4072 | - | 3.A.1.135.5 |
| TC | HRGMv2_2994_68 | HRGMv2_2994_68_3 | 4073 | 5851 | - | 3.A.1.135.7 |
| TF | HRGMv2_2994_68 | HRGMv2_2994_68_4 | 5938 | 6798 | + | HTH_1 |
| CAZyme | HRGMv2_2994_68 | HRGMv2_2994_68_5 | 6846 | 8669 | - | GH5_4 |
Gene ID: HRGMv2_2994_68_2
Type: TC
Location: 2291 - 4072 (-)
Type: TC
Location: 2291 - 4072 (-)
Gene ID: HRGMv2_2994_68_3
Type: TC
Location: 4073 - 5851 (-)
Type: TC
Location: 4073 - 5851 (-)
Gene ID: HRGMv2_2994_68_4
Type: TF
Location: 5938 - 6798 (+)
Type: TF
Location: 5938 - 6798 (+)
Gene ID: HRGMv2_2994_68_5
Type: CAZyme
Location: 6846 - 8669 (-)
Type: CAZyme
Location: 6846 - 8669 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
CAG-115
Species
CAG-115 sp000432175
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2994_68_3 | vegetarian > vegan | 1.09224 | 0.00226 |