Cluster: HRGMv2_2994_CGC14
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate: galactan
- Genome ID: HRGMv2_2994
- CGC Family ID: CGCFAM_00067
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2994_45 | HRGMv2_2994_45_14 | 11727 | 13631 | + | GH127 |
| TF | HRGMv2_2994_45 | HRGMv2_2994_45_15 | 13717 | 14565 | - | HTH_AraC | HTH_AraC |
| TC | HRGMv2_2994_45 | HRGMv2_2994_45_16 | 14773 | 16062 | + | 3.A.1.1.28 |
| TC | HRGMv2_2994_45 | HRGMv2_2994_45_17 | 16059 | 16937 | + | 3.A.1.1.28 |
| TC | HRGMv2_2994_45 | HRGMv2_2994_45_18 | 16934 | 17848 | + | 3.A.1.1.28 |
| CAZyme | HRGMv2_2994_45 | HRGMv2_2994_45_19 | 17908 | 19317 | + | GH13_18 |
| CAZyme | HRGMv2_2994_45 | HRGMv2_2994_45_20 | 19329 | 21518 | + | GH36 |
Gene ID: HRGMv2_2994_45_14
Type: CAZyme
Location: 11727 - 13631 (+)
Type: CAZyme
Location: 11727 - 13631 (+)
Gene ID: HRGMv2_2994_45_15
Type: TF
Location: 13717 - 14565 (-)
Type: TF
Location: 13717 - 14565 (-)
Gene ID: HRGMv2_2994_45_16
Type: TC
Location: 14773 - 16062 (+)
Type: TC
Location: 14773 - 16062 (+)
Gene ID: HRGMv2_2994_45_17
Type: TC
Location: 16059 - 16937 (+)
Type: TC
Location: 16059 - 16937 (+)
Gene ID: HRGMv2_2994_45_18
Type: TC
Location: 16934 - 17848 (+)
Type: TC
Location: 16934 - 17848 (+)
Gene ID: HRGMv2_2994_45_19
Type: CAZyme
Location: 17908 - 19317 (+)
Type: CAZyme
Location: 17908 - 19317 (+)
Gene ID: HRGMv2_2994_45_20
Type: CAZyme
Location: 19329 - 21518 (+)
Type: CAZyme
Location: 19329 - 21518 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
CAG-115
Species
CAG-115 sp000432175
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.