Cluster: HRGMv2_2994_CGC25
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate: beta-glucan
- Genome ID: HRGMv2_2994
- CGC Family ID: CGCFAM_00083
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2994_85 | HRGMv2_2994_85_4 | 3180 | 4439 | - | 1.B.52.2.2 |
| CAZyme | HRGMv2_2994_85 | HRGMv2_2994_85_5 | 4817 | 6562 | - | GH2 |
| TF | HRGMv2_2994_85 | HRGMv2_2994_85_6 | 6669 | 7484 | + | HTH_AraC |
| CAZyme | HRGMv2_2994_85 | HRGMv2_2994_85_7 | 7501 | 10494 | - | GH2 |
Gene ID: HRGMv2_2994_85_4
Type: TC
Location: 3180 - 4439 (-)
Type: TC
Location: 3180 - 4439 (-)
Gene ID: HRGMv2_2994_85_5
Type: CAZyme
Location: 4817 - 6562 (-)
Type: CAZyme
Location: 4817 - 6562 (-)
Gene ID: HRGMv2_2994_85_6
Type: TF
Location: 6669 - 7484 (+)
Type: TF
Location: 6669 - 7484 (+)
Gene ID: HRGMv2_2994_85_7
Type: CAZyme
Location: 7501 - 10494 (-)
Type: CAZyme
Location: 7501 - 10494 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
CAG-115
Species
CAG-115 sp000432175
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.