Cluster: HRGMv2_2994_CGC1
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2994
- CGC Family ID: CGCFAM_00002
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2994_1 | HRGMv2_2994_1_14 | 16232 | 18268 | + | 1.B.52.2.2 |
| CAZyme | HRGMv2_2994_1 | HRGMv2_2994_1_15 | 18331 | 19335 | - | GT4 |
| CAZyme | HRGMv2_2994_1 | HRGMv2_2994_1_16 | 19476 | 20438 | - | GT2 |
Gene ID: HRGMv2_2994_1_14
Type: TC
Location: 16232 - 18268 (+)
Type: TC
Location: 16232 - 18268 (+)
Gene ID: HRGMv2_2994_1_15
Type: CAZyme
Location: 18331 - 19335 (-)
Type: CAZyme
Location: 18331 - 19335 (-)
Gene ID: HRGMv2_2994_1_16
Type: CAZyme
Location: 19476 - 20438 (-)
Type: CAZyme
Location: 19476 - 20438 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
CAG-115
Species
CAG-115 sp000432175
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.