Cluster: HRGMv2_2994_CGC23
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2994
- CGC Family ID: CGCFAM_01096
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2994_71 | HRGMv2_2994_71_10 | 7082 | 8740 | + | 2.A.25.1.9 |
| TF | HRGMv2_2994_71 | HRGMv2_2994_71_11 | 8794 | 9606 | + | HTH_AraC |
| CAZyme | HRGMv2_2994_71 | HRGMv2_2994_71_12 | 9607 | 11418 | - | GH146 |
Gene ID: HRGMv2_2994_71_10
Type: TC
Location: 7082 - 8740 (+)
Type: TC
Location: 7082 - 8740 (+)
Gene ID: HRGMv2_2994_71_11
Type: TF
Location: 8794 - 9606 (+)
Type: TF
Location: 8794 - 9606 (+)
Gene ID: HRGMv2_2994_71_12
Type: CAZyme
Location: 9607 - 11418 (-)
Type: CAZyme
Location: 9607 - 11418 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
CAG-115
Species
CAG-115 sp000432175
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.