Genome Details
Selected Rep_genome_ID: HRGMv2_2893
Total Genomes Found: 3
Total Genomes Found: 3
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Scatomorpha
Species
Scatomorpha sp900545405
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| HRGMv2_2893 | 2,655,134 | 95.63% | 0% | Italy | Europe | HRGM |
| MGYG000004557 | 2,548,917 | 95.41% | 0.06% | France | Europe | UHGG |
| Rep_3137 | 2,605,582 | 94.9664% | 0% | NA | NA | WIS |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_2893_CGC11 | CGCFAM_00045 | Yes | 4 | 1 | alpha-glucan |
| HRGMv2_2893_CGC7 | CGCFAM_00045 | Yes | 4 | 1 | alpha-glucan |
| HRGMv2_2893_CGC22 | CGCFAM_00173 | Yes | 12 | 2 | |
| HRGMv2_2893_CGC23 | CGCFAM_00455 | Yes | 3 | 1 | |
| HRGMv2_2893_CGC12 | CGCFAM_01602 | Yes | 21 | 6 | |
| HRGMv2_2893_CGC4 | CGCFAM_01648 | Yes | 9 | 4 | |
| HRGMv2_2893_CGC6 | CGCFAM_02075 | Yes | 5 | 1 | |
| HRGMv2_2893_CGC21 | CGCFAM_02525 | Yes | 11 | 2 | |
| HRGMv2_2893_CGC19 | CGCFAM_04073 | Yes | 9 | 1 | |
| HRGMv2_2893_CGC10 | CGCFAM_05484 | Yes | 6 | 1 | |
| HRGMv2_2893_CGC13 | CGCFAM_08390 | Yes | 7 | 1 | |
| HRGMv2_2893_CGC3 | CGCFAM_10207 | Yes | 7 | 1 |
Top CAZyme Families