Cluster: HRGMv2_2893_CGC23
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2893
- CGC Family ID: CGCFAM_00455
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2893_52 | HRGMv2_2893_52_9 | 7356 | 8720 | - | 3.A.5.1.1 |
| TF | HRGMv2_2893_52 | HRGMv2_2893_52_10 | 8734 | 9090 | - | HTH_11 |
| CAZyme | HRGMv2_2893_52 | HRGMv2_2893_52_11 | 9253 | 14136 | + | GT84 |
Gene ID: HRGMv2_2893_52_9
Type: TC
Location: 7356 - 8720 (-)
Type: TC
Location: 7356 - 8720 (-)
Gene ID: HRGMv2_2893_52_10
Type: TF
Location: 8734 - 9090 (-)
Type: TF
Location: 8734 - 9090 (-)
Gene ID: HRGMv2_2893_52_11
Type: CAZyme
Location: 9253 - 14136 (+)
Type: CAZyme
Location: 9253 - 14136 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Scatomorpha
Species
Scatomorpha sp900545405
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2893_52_11 | vegetarian > vegan | 1.45806 | 0.00566 |