Cluster: HRGMv2_2893_CGC10
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2893
- CGC Family ID: CGCFAM_05484
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2893_5 | HRGMv2_2893_5_80 | 86160 | 87953 | + | CBM34 | GH13_20 |
| STP | HRGMv2_2893_5 | HRGMv2_2893_5_81 | 87962 | 89278 | + | SBP_bac_1 |
| TC | HRGMv2_2893_5 | HRGMv2_2893_5_82 | 89380 | 90273 | + | 3.A.1.1.4 |
| TC | HRGMv2_2893_5 | HRGMv2_2893_5_83 | 90282 | 91133 | + | 3.A.1.1.25 |
| pfam | HRGMv2_2893_5 | HRGMv2_2893_5_84 | 91572 | 97703 | + | SLH | SLH | SLH | DUF5689 |
| TC | HRGMv2_2893_5 | HRGMv2_2893_5_85 | 97805 | 98986 | + | 9.B.141.1.1 |
Gene ID: HRGMv2_2893_5_80
Type: CAZyme
Location: 86160 - 87953 (+)
Type: CAZyme
Location: 86160 - 87953 (+)
Gene ID: HRGMv2_2893_5_81
Type: STP
Location: 87962 - 89278 (+)
Type: STP
Location: 87962 - 89278 (+)
Gene ID: HRGMv2_2893_5_82
Type: TC
Location: 89380 - 90273 (+)
Type: TC
Location: 89380 - 90273 (+)
Gene ID: HRGMv2_2893_5_83
Type: TC
Location: 90282 - 91133 (+)
Type: TC
Location: 90282 - 91133 (+)
Gene ID: HRGMv2_2893_5_84
Type: pfam
Location: 91572 - 97703 (+)
Type: pfam
Location: 91572 - 97703 (+)
Gene ID: HRGMv2_2893_5_85
Type: TC
Location: 97805 - 98986 (+)
Type: TC
Location: 97805 - 98986 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Scatomorpha
Species
Scatomorpha sp900545405
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.