Cluster: HRGMv2_2893_CGC6
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2893
- CGC Family ID: CGCFAM_02075
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2893_4 | HRGMv2_2893_4_13 | 12676 | 13944 | + | 2.A.47.4.1 |
| TC | HRGMv2_2893_4 | HRGMv2_2893_4_14 | 13963 | 15507 | + | 4.C.1.1.4 |
| pfam | HRGMv2_2893_4 | HRGMv2_2893_4_15 | 15528 | 16304 | + | ETF |
| pfam | HRGMv2_2893_4 | HRGMv2_2893_4_16 | 16316 | 17245 | + | ETF_alpha | ETF |
| CAZyme | HRGMv2_2893_4 | HRGMv2_2893_4_17 | 17259 | 18623 | + | AA7 |
Gene ID: HRGMv2_2893_4_13
Type: TC
Location: 12676 - 13944 (+)
Type: TC
Location: 12676 - 13944 (+)
Gene ID: HRGMv2_2893_4_14
Type: TC
Location: 13963 - 15507 (+)
Type: TC
Location: 13963 - 15507 (+)
Gene ID: HRGMv2_2893_4_15
Type: pfam
Location: 15528 - 16304 (+)
Type: pfam
Location: 15528 - 16304 (+)
Gene ID: HRGMv2_2893_4_16
Type: pfam
Location: 16316 - 17245 (+)
Type: pfam
Location: 16316 - 17245 (+)
Gene ID: HRGMv2_2893_4_17
Type: CAZyme
Location: 17259 - 18623 (+)
Type: CAZyme
Location: 17259 - 18623 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Scatomorpha
Species
Scatomorpha sp900545405
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.