Cluster: HRGMv2_2893_CGC7
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate: alpha-glucan
- Genome ID: HRGMv2_2893
- CGC Family ID: CGCFAM_00045
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2893_4 | HRGMv2_2893_4_42 | 48996 | 50714 | - | CBM34 | GH13_20 |
| TC | HRGMv2_2893_4 | HRGMv2_2893_4_43 | 50717 | 51562 | - | 3.A.1.1.6 |
| TC | HRGMv2_2893_4 | HRGMv2_2893_4_44 | 51559 | 52464 | - | 3.A.1.1.41 |
| TC | HRGMv2_2893_4 | HRGMv2_2893_4_45 | 52464 | 53663 | - | 3.A.1.1.16 |
Gene ID: HRGMv2_2893_4_42
Type: CAZyme
Location: 48996 - 50714 (-)
Type: CAZyme
Location: 48996 - 50714 (-)
Gene ID: HRGMv2_2893_4_43
Type: TC
Location: 50717 - 51562 (-)
Type: TC
Location: 50717 - 51562 (-)
Gene ID: HRGMv2_2893_4_44
Type: TC
Location: 51559 - 52464 (-)
Type: TC
Location: 51559 - 52464 (-)
Gene ID: HRGMv2_2893_4_45
Type: TC
Location: 52464 - 53663 (-)
Type: TC
Location: 52464 - 53663 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Scatomorpha
Species
Scatomorpha sp900545405
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2893_4_42 | vegetarian > vegan | 1.22554 | 0.00566 |
| HRGMv2_2893_4_43 | vegetarian > vegan | 2.00469 | 0.00566 |