Genome Details
Selected Rep_genome_ID: HRGMv2_2604
Total Genomes Found: 23
Total Genomes Found: 23
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
UBA1381
Family
UBA1381
Genus
Hominilimicola
Species
Hominilimicola fabiformis
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| A103.CMAG_5 | 3,013,246 | 97.99% | 1.01% | China(Inner Mongolia) | Asia | IMGG |
| CGMR058723 | 2,746,941 | 97.99% | 0.34% | China | Asia | CGMR |
| GH183_13_sub | 2,997,188 | 97.99% | 1.01% | NA | Africa | H3AfricaPhase2 |
| HRGMv2_2604 | 2,426,510 | 98.65% | 0% | Malaysia | Asia | HRGM |
| Rep_3424 | 2,841,558 | 94.4072% | 1.34228% | NA | NA | WIS |
| SPMP03_bin.123 | 2,866,913 | 96.64% | 1.23% | Singapore | Asia | SPMP |
| SPMP08_bin.72 | 2,933,329 | 97.99% | 1.68% | Singapore | Asia | SPMP |
| SPMP09_bin.1 | 2,940,128 | 93.29% | 1.34% | Singapore | Asia | SPMP |
| SPMP106_bin.10 | 3,326,288 | 96.48% | 3.19% | Singapore | Asia | SPMP |
| SPMP108_bin.32 | 2,760,738 | 93.96% | 0.67% | Singapore | Asia | SPMP |
| SPMP11_bin.107 | 2,790,996 | 93.1% | 3.69% | Singapore | Asia | SPMP |
| SPMP26_bin.111 | 2,891,794 | 97.99% | 1.34% | Singapore | Asia | SPMP |
| SPMP35_bin.13 | 2,840,088 | 97.32% | 0.84% | Singapore | Asia | SPMP |
| SPMP36_bin.99 | 2,734,995 | 95.97% | 1.01% | Singapore | Asia | SPMP |
| SPMP40_bin.131 | 2,799,342 | 96.98% | 2.35% | Singapore | Asia | SPMP |
| SPMP48_bin.143 | 3,100,054 | 97.32% | 1.34% | Singapore | Asia | SPMP |
| SPMP63_bin.55 | 2,648,983 | 97.32% | 1.01% | Singapore | Asia | SPMP |
| SPMP66_bin.9 | 2,687,926 | 97.15% | 0.67% | Singapore | Asia | SPMP |
| SPMP87_bin.5 | 2,616,025 | 97.99% | 0.67% | Singapore | Asia | SPMP |
| SPMP89_bin.92 | 2,645,843 | 95.47% | 1.01% | Singapore | Asia | SPMP |
| SPMP90_bin.30 | 3,217,689 | 96.31% | 0.67% | Singapore | Asia | SPMP |
| SPMP94_bin.79 | 2,798,518 | 95.08% | 0.84% | Singapore | Asia | SPMP |
| SPMP96_bin.35 | 2,800,872 | 96.32% | 1.17% | Singapore | Asia | SPMP |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_2604_CGC18 | CGCFAM_00004 | Yes | 12 | 4 | alpha-glucan |
| HRGMv2_2604_CGC34 | CGCFAM_00085 | Yes | 4 | 1 | |
| HRGMv2_2604_CGC2 | CGCFAM_00112 | Yes | 6 | 1 | |
| HRGMv2_2604_CGC3 | CGCFAM_00250 | Yes | 4 | 1 | |
| HRGMv2_2604_CGC15 | CGCFAM_00681 | Yes | 4 | 1 | |
| HRGMv2_2604_CGC28 | CGCFAM_00693 | Yes | 7 | 1 | |
| HRGMv2_2604_CGC29 | CGCFAM_00920 | Yes | 5 | 2 | |
| HRGMv2_2604_CGC14 | CGCFAM_01264 | Yes | 3 | 1 | |
| HRGMv2_2604_CGC13 | CGCFAM_01334 | Yes | 8 | 4 | |
| HRGMv2_2604_CGC6 | CGCFAM_03803 | Yes | 5 | 1 | |
| HRGMv2_2604_CGC22 | CGCFAM_04683 | Yes | 4 | 1 | |
| HRGMv2_2604_CGC25 | CGCFAM_08667 | Yes | 7 | 3 | |
| HRGMv2_2604_CGC16 | CGCFAM_09328 | Yes | 5 | 1 | |
| HRGMv2_2604_CGC5 | CGCFAM_10114 | Yes | 5 | 3 |
Top CAZyme Families