Cluster: HRGMv2_2604_CGC5
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_2604
- CGC Family ID: CGCFAM_10114
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2604_3 | HRGMv2_2604_3_17 | 13596 | 14852 | - | 9.B.97.5.1 |
| NULL(UNKNOWN) | HRGMv2_2604_3 | HRGMv2_2604_3_18 | 14845 | 15075 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_2604_3 | HRGMv2_2604_3_19 | 15113 | 16297 | - | CE4 |
| CAZyme | HRGMv2_2604_3 | HRGMv2_2604_3_20 | 16421 | 17224 | + | CE4 |
| CAZyme | HRGMv2_2604_3 | HRGMv2_2604_3_21 | 17328 | 20144 | + | PL11_1 |
Gene ID: HRGMv2_2604_3_17
Type: TC
Location: 13596 - 14852 (-)
Type: TC
Location: 13596 - 14852 (-)
Gene ID: HRGMv2_2604_3_18
Type:
Location: 14845 - 15075 (-)
Type:
Location: 14845 - 15075 (-)
Gene ID: HRGMv2_2604_3_19
Type: CAZyme
Location: 15113 - 16297 (-)
Type: CAZyme
Location: 15113 - 16297 (-)
Gene ID: HRGMv2_2604_3_20
Type: CAZyme
Location: 16421 - 17224 (+)
Type: CAZyme
Location: 16421 - 17224 (+)
Gene ID: HRGMv2_2604_3_21
Type: CAZyme
Location: 17328 - 20144 (+)
Type: CAZyme
Location: 17328 - 20144 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
UBA1381
Family
UBA1381
Genus
Hominilimicola
Species
Hominilimicola fabiformis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.