Cluster: HRGMv2_2604_CGC3
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2604
- CGC Family ID: CGCFAM_00250
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2604_2 | HRGMv2_2604_2_36 | 35002 | 36609 | + | 3.A.1.121.4 |
| NULL(UNKNOWN) | HRGMv2_2604_2 | HRGMv2_2604_2_37 | 36610 | 37260 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| sulfatase | HRGMv2_2604_2 | HRGMv2_2604_2_38 | 37257 | 37769 | + | S1_8 |
| CAZyme | HRGMv2_2604_2 | HRGMv2_2604_2_39 | 37891 | 40650 | + | PL11_1 |
Gene ID: HRGMv2_2604_2_36
Type: TC
Location: 35002 - 36609 (+)
Type: TC
Location: 35002 - 36609 (+)
Gene ID: HRGMv2_2604_2_37
Type:
Location: 36610 - 37260 (+)
Type:
Location: 36610 - 37260 (+)
Gene ID: HRGMv2_2604_2_38
Type: sulfatase
Location: 37257 - 37769 (+)
Type: sulfatase
Location: 37257 - 37769 (+)
Gene ID: HRGMv2_2604_2_39
Type: CAZyme
Location: 37891 - 40650 (+)
Type: CAZyme
Location: 37891 - 40650 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
UBA1381
Family
UBA1381
Genus
Hominilimicola
Species
Hominilimicola fabiformis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2604_2_37 | vegetarian > omnivore | 1.59415 | 0.01061 |