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Cluster: HRGMv2_2604_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2604_9 HRGMv2_2604_9_8 22910 26074 + GH36
TC HRGMv2_2604_9 HRGMv2_2604_9_9 26071 27045 + 3.A.1.1.29
TC HRGMv2_2604_9 HRGMv2_2604_9_10 27059 27961 + 3.A.1.1.29
TC HRGMv2_2604_9 HRGMv2_2604_9_11 27988 29568 + 3.A.1.1.29
CAZyme HRGMv2_2604_9 HRGMv2_2604_9_12 29651 31831 + GH36
CAZyme HRGMv2_2604_9 HRGMv2_2604_9_13 32008 34806 - CBM32 | CBM32 | GH141
NULL(UNKNOWN) HRGMv2_2604_9 HRGMv2_2604_9_14 34849 35367 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_2604_9 HRGMv2_2604_9_15 35941 36924 + GH29
Gene ID: HRGMv2_2604_9_8
Type: CAZyme
Location: 22910 - 26074 (+)
Gene ID: HRGMv2_2604_9_9
Type: TC
Location: 26071 - 27045 (+)
Gene ID: HRGMv2_2604_9_10
Type: TC
Location: 27059 - 27961 (+)
Gene ID: HRGMv2_2604_9_11
Type: TC
Location: 27988 - 29568 (+)
Gene ID: HRGMv2_2604_9_12
Type: CAZyme
Location: 29651 - 31831 (+)
Gene ID: HRGMv2_2604_9_13
Type: CAZyme
Location: 32008 - 34806 (-)
Gene ID: HRGMv2_2604_9_14
Type:
Location: 34849 - 35367 (-)
Gene ID: HRGMv2_2604_9_15
Type: CAZyme
Location: 35941 - 36924 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
UBA1381
→
Family
UBA1381
→
Genus
Hominilimicola
→
Species
Hominilimicola fabiformis

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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