Cluster: HRGMv2_2604_CGC25
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_2604
- CGC Family ID: CGCFAM_08667
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2604_42 | HRGMv2_2604_42_2 | 2076 | 3008 | + | 3.A.1.1.9 |
| TC | HRGMv2_2604_42 | HRGMv2_2604_42_3 | 3023 | 3976 | + | 3.A.1.1.29 |
| CAZyme | HRGMv2_2604_42 | HRGMv2_2604_42_4 | 4007 | 6556 | + | GH5 |
| pfam | HRGMv2_2604_42 | HRGMv2_2604_42_5 | 6571 | 12231 | + | SLH | SLH | SLH |
| NULL(UNKNOWN) | HRGMv2_2604_42 | HRGMv2_2604_42_6 | 12245 | 15259 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_2604_42 | HRGMv2_2604_42_7 | 15456 | 16559 | + | GH88 |
| CAZyme | HRGMv2_2604_42 | HRGMv2_2604_42_8 | 16571 | 18661 | + | GH94 |
Gene ID: HRGMv2_2604_42_2
Type: TC
Location: 2076 - 3008 (+)
Type: TC
Location: 2076 - 3008 (+)
Gene ID: HRGMv2_2604_42_3
Type: TC
Location: 3023 - 3976 (+)
Type: TC
Location: 3023 - 3976 (+)
Gene ID: HRGMv2_2604_42_4
Type: CAZyme
Location: 4007 - 6556 (+)
Type: CAZyme
Location: 4007 - 6556 (+)
Gene ID: HRGMv2_2604_42_5
Type: pfam
Location: 6571 - 12231 (+)
Type: pfam
Location: 6571 - 12231 (+)
Gene ID: HRGMv2_2604_42_6
Type:
Location: 12245 - 15259 (+)
Type:
Location: 12245 - 15259 (+)
Gene ID: HRGMv2_2604_42_7
Type: CAZyme
Location: 15456 - 16559 (+)
Type: CAZyme
Location: 15456 - 16559 (+)
Gene ID: HRGMv2_2604_42_8
Type: CAZyme
Location: 16571 - 18661 (+)
Type: CAZyme
Location: 16571 - 18661 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
UBA1381
Family
UBA1381
Genus
Hominilimicola
Species
Hominilimicola fabiformis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.