Genome Details
Selected Rep_genome_ID: HRGMv2_1913
Total Genomes Found: 3
Total Genomes Found: 3
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Clostridium_AQ
Species
Clostridium_AQ sp000165065
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| AG386_2 | 3,561,353 | 91.42% | 0.04% | NA | Africa | H3AfricaPhase2 |
| HRGMv2_1913 | 4,255,712 | 100% | 0% | South Korea | Asia | HRGM |
| Rep_1275 | 4,166,679 | 100% | 0% | NA | NA | WIS |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_1913_CGC17 | CGCFAM_00020 | Yes | 4 | 1 | host glycan/beta-glucan |
| HRGMv2_1913_CGC23 | CGCFAM_00029 | Yes | 11 | 4 | |
| HRGMv2_1913_CGC28 | CGCFAM_00042 | Yes | 5 | 1 | beta-glucan |
| HRGMv2_1913_CGC12 | CGCFAM_00092 | Yes | 9 | 1 | |
| HRGMv2_1913_CGC13 | CGCFAM_00115 | Yes | 5 | 1 | |
| HRGMv2_1913_CGC6 | CGCFAM_01125 | Yes | 11 | 4 | |
| HRGMv2_1913_CGC16 | CGCFAM_02056 | Yes | 6 | 1 | |
| HRGMv2_1913_CGC19 | CGCFAM_02423 | Yes | 7 | 2 | |
| HRGMv2_1913_CGC14 | CGCFAM_03897 | Yes | 4 | 1 | |
| HRGMv2_1913_CGC31 | CGCFAM_04283 | Yes | 7 | 1 | |
| HRGMv2_1913_CGC24 | CGCFAM_04365 | Yes | 3 | 2 | |
| HRGMv2_1913_CGC11 | CGCFAM_05267 | Yes | 8 | 1 | |
| HRGMv2_1913_CGC1 | CGCFAM_08011 | Yes | 6 | 1 |
Top CAZyme Families