Cluster: HRGMv2_1913_CGC1
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1913
- CGC Family ID: CGCFAM_08011
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_1913_1 | HRGMv2_1913_1_43 | 43356 | 44300 | + | GT14 |
| NULL(UNKNOWN) | HRGMv2_1913_1 | HRGMv2_1913_1_44 | 44896 | 45207 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_1913_1 | HRGMv2_1913_1_45 | 45325 | 46140 | - | 4.A.6.1.16 |
| pfam | HRGMv2_1913_1 | HRGMv2_1913_1_46 | 46143 | 46979 | - | EII-Sor |
| TC | HRGMv2_1913_1 | HRGMv2_1913_1_47 | 47048 | 47539 | - | 4.A.6.1.9 |
| TC | HRGMv2_1913_1 | HRGMv2_1913_1_48 | 47558 | 47989 | - | 4.A.6.1.11 |
Gene ID: HRGMv2_1913_1_43
Type: CAZyme
Location: 43356 - 44300 (+)
Type: CAZyme
Location: 43356 - 44300 (+)
Gene ID: HRGMv2_1913_1_44
Type:
Location: 44896 - 45207 (-)
Type:
Location: 44896 - 45207 (-)
Gene ID: HRGMv2_1913_1_45
Type: TC
Location: 45325 - 46140 (-)
Type: TC
Location: 45325 - 46140 (-)
Gene ID: HRGMv2_1913_1_46
Type: pfam
Location: 46143 - 46979 (-)
Type: pfam
Location: 46143 - 46979 (-)
Gene ID: HRGMv2_1913_1_47
Type: TC
Location: 47048 - 47539 (-)
Type: TC
Location: 47048 - 47539 (-)
Gene ID: HRGMv2_1913_1_48
Type: TC
Location: 47558 - 47989 (-)
Type: TC
Location: 47558 - 47989 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Clostridium_AQ
Species
Clostridium_AQ sp000165065
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.