Cluster: HRGMv2_1913_CGC16
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1913
- CGC Family ID: CGCFAM_02056
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_1913_7 | HRGMv2_1913_7_55 | 56265 | 56576 | + | 4.A.3.2.7 |
| pfam | HRGMv2_1913_7 | HRGMv2_1913_7_56 | 56576 | 57220 | + | RDD |
| TF | HRGMv2_1913_7 | HRGMv2_1913_7_57 | 57312 | 58031 | - | HTH_6 |
| CAZyme | HRGMv2_1913_7 | HRGMv2_1913_7_58 | 58096 | 59505 | + | GH4 |
| TC | HRGMv2_1913_7 | HRGMv2_1913_7_59 | 59502 | 60806 | + | 4.A.3.2.2 |
| TC | HRGMv2_1913_7 | HRGMv2_1913_7_60 | 60793 | 61104 | + | 4.A.3.2.8 |
Gene ID: HRGMv2_1913_7_55
Type: TC
Location: 56265 - 56576 (+)
Type: TC
Location: 56265 - 56576 (+)
Gene ID: HRGMv2_1913_7_56
Type: pfam
Location: 56576 - 57220 (+)
Type: pfam
Location: 56576 - 57220 (+)
Gene ID: HRGMv2_1913_7_57
Type: TF
Location: 57312 - 58031 (-)
Type: TF
Location: 57312 - 58031 (-)
Gene ID: HRGMv2_1913_7_58
Type: CAZyme
Location: 58096 - 59505 (+)
Type: CAZyme
Location: 58096 - 59505 (+)
Gene ID: HRGMv2_1913_7_59
Type: TC
Location: 59502 - 60806 (+)
Type: TC
Location: 59502 - 60806 (+)
Gene ID: HRGMv2_1913_7_60
Type: TC
Location: 60793 - 61104 (+)
Type: TC
Location: 60793 - 61104 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Clostridium_AQ
Species
Clostridium_AQ sp000165065
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.