Cluster: HRGMv2_1913_CGC19
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_1913
- CGC Family ID: CGCFAM_02423
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_1913_8 | HRGMv2_1913_8_42 | 47235 | 48611 | - | GH1 |
| TF | HRGMv2_1913_8 | HRGMv2_1913_8_43 | 48705 | 49508 | - | HTH_6 |
| CAZyme | HRGMv2_1913_8 | HRGMv2_1913_8_44 | 49541 | 52150 | - | GH38 |
| TC | HRGMv2_1913_8 | HRGMv2_1913_8_45 | 52163 | 52615 | - | 4.A.2.1.7 |
| TC | HRGMv2_1913_8 | HRGMv2_1913_8_46 | 52628 | 54100 | - | 4.A.2.1.6 |
| NULL(UNKNOWN) | HRGMv2_1913_8 | HRGMv2_1913_8_47 | 54235 | 54402 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_1913_8 | HRGMv2_1913_8_48 | 54549 | 56573 | - | 3.A.16.1.1 |
Gene ID: HRGMv2_1913_8_42
Type: CAZyme
Location: 47235 - 48611 (-)
Type: CAZyme
Location: 47235 - 48611 (-)
Gene ID: HRGMv2_1913_8_43
Type: TF
Location: 48705 - 49508 (-)
Type: TF
Location: 48705 - 49508 (-)
Gene ID: HRGMv2_1913_8_44
Type: CAZyme
Location: 49541 - 52150 (-)
Type: CAZyme
Location: 49541 - 52150 (-)
Gene ID: HRGMv2_1913_8_45
Type: TC
Location: 52163 - 52615 (-)
Type: TC
Location: 52163 - 52615 (-)
Gene ID: HRGMv2_1913_8_46
Type: TC
Location: 52628 - 54100 (-)
Type: TC
Location: 52628 - 54100 (-)
Gene ID: HRGMv2_1913_8_47
Type:
Location: 54235 - 54402 (-)
Type:
Location: 54235 - 54402 (-)
Gene ID: HRGMv2_1913_8_48
Type: TC
Location: 54549 - 56573 (-)
Type: TC
Location: 54549 - 56573 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Clostridium_AQ
Species
Clostridium_AQ sp000165065
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.