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Cluster: HRGMv2_1913_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1913_2 HRGMv2_1913_2_64 64963 66300 + 9.B.18.1.3
pfam HRGMv2_1913_2 HRGMv2_1913_2_65 66297 66827 + NusG
TC HRGMv2_1913_2 HRGMv2_1913_2_66 66964 67665 + 8.A.3.2.3
pfam HRGMv2_1913_2 HRGMv2_1913_2_67 67669 68451 + CpsB_CapC
TC HRGMv2_1913_2 HRGMv2_1913_2_68 68456 69172 + 8.A.3.3.3
pfam HRGMv2_1913_2 HRGMv2_1913_2_69 69211 69813 + Resolvase
pfam HRGMv2_1913_2 HRGMv2_1913_2_70 69800 71233 + LytR_cpsA_psr
CAZyme HRGMv2_1913_2 HRGMv2_1913_2_71 72149 73279 + GT4
CAZyme HRGMv2_1913_2 HRGMv2_1913_2_72 73307 74404 + GT4
CAZyme HRGMv2_1913_2 HRGMv2_1913_2_73 74418 75488 + GT4
CAZyme HRGMv2_1913_2 HRGMv2_1913_2_74 75495 76697 + GT4
Gene ID: HRGMv2_1913_2_64
Type: TC
Location: 64963 - 66300 (+)
Gene ID: HRGMv2_1913_2_65
Type: pfam
Location: 66297 - 66827 (+)
Gene ID: HRGMv2_1913_2_66
Type: TC
Location: 66964 - 67665 (+)
Gene ID: HRGMv2_1913_2_67
Type: pfam
Location: 67669 - 68451 (+)
Gene ID: HRGMv2_1913_2_68
Type: TC
Location: 68456 - 69172 (+)
Gene ID: HRGMv2_1913_2_69
Type: pfam
Location: 69211 - 69813 (+)
Gene ID: HRGMv2_1913_2_70
Type: pfam
Location: 69800 - 71233 (+)
Gene ID: HRGMv2_1913_2_71
Type: CAZyme
Location: 72149 - 73279 (+)
Gene ID: HRGMv2_1913_2_72
Type: CAZyme
Location: 73307 - 74404 (+)
Gene ID: HRGMv2_1913_2_73
Type: CAZyme
Location: 74418 - 75488 (+)
Gene ID: HRGMv2_1913_2_74
Type: CAZyme
Location: 75495 - 76697 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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