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Cluster: HRGMv2_1913_CGC31

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1913_31 HRGMv2_1913_31_15 13834 14574 - 3.A.1.3.20
TC HRGMv2_1913_31 HRGMv2_1913_31_16 14576 15346 - 3.A.1.3.20
TC HRGMv2_1913_31 HRGMv2_1913_31_17 15364 16197 - 3.A.1.3.20
pfam HRGMv2_1913_31 HRGMv2_1913_31_18 16694 17152 - VanZ
CAZyme HRGMv2_1913_31 HRGMv2_1913_31_19 17242 18558 - CE4
pfam HRGMv2_1913_31 HRGMv2_1913_31_20 19542 21134 - FAD-depend_C
TC HRGMv2_1913_31 HRGMv2_1913_31_21 21148 22185 - 9.B.97.1.4
Gene ID: HRGMv2_1913_31_15
Type: TC
Location: 13834 - 14574 (-)
Gene ID: HRGMv2_1913_31_16
Type: TC
Location: 14576 - 15346 (-)
Gene ID: HRGMv2_1913_31_17
Type: TC
Location: 15364 - 16197 (-)
Gene ID: HRGMv2_1913_31_18
Type: pfam
Location: 16694 - 17152 (-)
Gene ID: HRGMv2_1913_31_19
Type: CAZyme
Location: 17242 - 18558 (-)
Gene ID: HRGMv2_1913_31_20
Type: pfam
Location: 19542 - 21134 (-)
Gene ID: HRGMv2_1913_31_21
Type: TC
Location: 21148 - 22185 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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