Cluster: HRGMv2_1913_CGC24
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_1913
- CGC Family ID: CGCFAM_04365
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_1913_16 | HRGMv2_1913_16_91 | 85517 | 87988 | + | GH18 |
| TC | HRGMv2_1913_16 | HRGMv2_1913_16_92 | 88068 | 88481 | + | 1.E.19.1.11 |
| CAZyme | HRGMv2_1913_16 | HRGMv2_1913_16_93 | 88483 | 89961 | + | GH25 |
Gene ID: HRGMv2_1913_16_91
Type: CAZyme
Location: 85517 - 87988 (+)
Type: CAZyme
Location: 85517 - 87988 (+)
Gene ID: HRGMv2_1913_16_92
Type: TC
Location: 88068 - 88481 (+)
Type: TC
Location: 88068 - 88481 (+)
Gene ID: HRGMv2_1913_16_93
Type: CAZyme
Location: 88483 - 89961 (+)
Type: CAZyme
Location: 88483 - 89961 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Clostridium_AQ
Species
Clostridium_AQ sp000165065
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_1913_16_91 | omnivore > vegan | 1.58896 | 0.03854 |