Cluster: HRGMv2_1913_CGC17
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate: host glycan/beta-glucan
- Genome ID: HRGMv2_1913
- CGC Family ID: CGCFAM_00020
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_1913_7 | HRGMv2_1913_7_76 | 78690 | 79169 | + | 4.A.1.1.13 |
| pfam | HRGMv2_1913_7 | HRGMv2_1913_7_77 | 79191 | 80027 | + | PRD | PRD | CAT_RBD |
| TC | HRGMv2_1913_7 | HRGMv2_1913_7_78 | 80172 | 81548 | + | 4.A.1.2.3 |
| CAZyme | HRGMv2_1913_7 | HRGMv2_1913_7_79 | 81568 | 82998 | + | GH1 |
Gene ID: HRGMv2_1913_7_76
Type: TC
Location: 78690 - 79169 (+)
Type: TC
Location: 78690 - 79169 (+)
Gene ID: HRGMv2_1913_7_77
Type: pfam
Location: 79191 - 80027 (+)
Type: pfam
Location: 79191 - 80027 (+)
Gene ID: HRGMv2_1913_7_78
Type: TC
Location: 80172 - 81548 (+)
Type: TC
Location: 80172 - 81548 (+)
Gene ID: HRGMv2_1913_7_79
Type: CAZyme
Location: 81568 - 82998 (+)
Type: CAZyme
Location: 81568 - 82998 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Clostridium_AQ
Species
Clostridium_AQ sp000165065
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.