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Cluster: HRGMv2_1913_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1913_4 HRGMv2_1913_4_79 89221 90225 + GH179
TC HRGMv2_1913_4 HRGMv2_1913_4_80 90480 91904 + 4.A.2.1.5
pfam HRGMv2_1913_4 HRGMv2_1913_4_81 91964 92623 + Hydrolase | HAD_2
TC HRGMv2_1913_4 HRGMv2_1913_4_82 92642 93091 + 4.A.7.1.1
pfam HRGMv2_1913_4 HRGMv2_1913_4_83 93096 94001 + ROK
TF HRGMv2_1913_4 HRGMv2_1913_4_84 94375 95196 - MerR
TC HRGMv2_1913_4 HRGMv2_1913_4_85 95283 97013 + 3.A.1.135.7
TC HRGMv2_1913_4 HRGMv2_1913_4_86 97006 98805 + 3.A.1.135.7
Gene ID: HRGMv2_1913_4_79
Type: CAZyme
Location: 89221 - 90225 (+)
Gene ID: HRGMv2_1913_4_80
Type: TC
Location: 90480 - 91904 (+)
Gene ID: HRGMv2_1913_4_81
Type: pfam
Location: 91964 - 92623 (+)
Gene ID: HRGMv2_1913_4_82
Type: TC
Location: 92642 - 93091 (+)
Gene ID: HRGMv2_1913_4_83
Type: pfam
Location: 93096 - 94001 (+)
Gene ID: HRGMv2_1913_4_84
Type: TF
Location: 94375 - 95196 (-)
Gene ID: HRGMv2_1913_4_85
Type: TC
Location: 95283 - 97013 (+)
Gene ID: HRGMv2_1913_4_86
Type: TC
Location: 97006 - 98805 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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