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Cluster: HRGMv2_1913_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1913_5 HRGMv2_1913_5_180 176088 177422 + 3.A.1.1.18
TC HRGMv2_1913_5 HRGMv2_1913_5_181 177496 178377 + 3.A.1.1.28
TC HRGMv2_1913_5 HRGMv2_1913_5_182 178390 179256 + 3.A.1.1.18
CAZyme HRGMv2_1913_5 HRGMv2_1913_5_183 179270 181441 + GH112
pfam HRGMv2_1913_5 HRGMv2_1913_5_184 181441 181611 + DUF6903
TC HRGMv2_1913_5 HRGMv2_1913_5_185 181627 182718 + 3.A.1.1.26
NULL(UNKNOWN) HRGMv2_1913_5 HRGMv2_1913_5_186 183052 183507 + NULL(UNKNOWN)
[View Structural Homologs]
TF HRGMv2_1913_5 HRGMv2_1913_5_187 183650 184444 - MerR
TC HRGMv2_1913_5 HRGMv2_1913_5_188 184508 185842 + 2.A.66.1.7
Gene ID: HRGMv2_1913_5_180
Type: TC
Location: 176088 - 177422 (+)
Gene ID: HRGMv2_1913_5_181
Type: TC
Location: 177496 - 178377 (+)
Gene ID: HRGMv2_1913_5_182
Type: TC
Location: 178390 - 179256 (+)
Gene ID: HRGMv2_1913_5_183
Type: CAZyme
Location: 179270 - 181441 (+)
Gene ID: HRGMv2_1913_5_184
Type: pfam
Location: 181441 - 181611 (+)
Gene ID: HRGMv2_1913_5_185
Type: TC
Location: 181627 - 182718 (+)
Gene ID: HRGMv2_1913_5_186
Type:
Location: 183052 - 183507 (+)
Gene ID: HRGMv2_1913_5_187
Type: TF
Location: 183650 - 184444 (-)
Gene ID: HRGMv2_1913_5_188
Type: TC
Location: 184508 - 185842 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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