Genome Details
Selected Rep_genome_ID: HRGMv2_1796
Total Genomes Found: 5
Total Genomes Found: 5
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Species
Citrobacter braakii
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| C62.bin_30 | 4,815,642 | 93.1% | 3.13% | China(Inner Mongolia) | Asia | IMGG |
| CGMR044412 | 4,946,371 | 99.93% | 0.94% | China | Asia | CGMR |
| HRGMv2_1796 | 4,968,283 | 99.96% | 0.402% | Japan | Asia | HRGM |
| MGYG000002816 | 4,948,992 | 100% | 0.72% | United States | North America | UHGG |
| Rep_967 | 4,663,053 | 95.8003% | 0.510947% | NA | NA | WIS |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_1796_CGC17 | CGCFAM_00236 | Yes | 9 | 1 | |
| HRGMv2_1796_CGC52 | CGCFAM_00281 | Yes | 7 | 4 | |
| HRGMv2_1796_CGC13 | CGCFAM_00443 | Yes | 10 | 1 | host glycan |
| HRGMv2_1796_CGC40 | CGCFAM_00473 | Yes | 17 | 2 | |
| HRGMv2_1796_CGC16 | CGCFAM_00565 | Yes | 10 | 2 | |
| HRGMv2_1796_CGC54 | CGCFAM_00695 | Yes | 19 | 3 | |
| HRGMv2_1796_CGC32 | CGCFAM_01019 | Yes | 5 | 2 | |
| HRGMv2_1796_CGC58 | CGCFAM_01194 | Yes | 12 | 2 | |
| HRGMv2_1796_CGC35 | CGCFAM_02774 | Yes | 7 | 2 | |
| HRGMv2_1796_CGC22 | CGCFAM_02793 | Yes | 11 | 1 | |
| HRGMv2_1796_CGC37 | CGCFAM_03299 | Yes | 6 | 1 | |
| HRGMv2_1796_CGC57 | CGCFAM_04023 | Yes | 19 | 1 | |
| HRGMv2_1796_CGC2 | CGCFAM_04605 | Yes | 3 | 1 | |
| HRGMv2_1796_CGC19 | CGCFAM_06469 | Yes | 4 | 1 | |
| HRGMv2_1796_CGC9 | CGCFAM_08481 | Yes | 10 | 3 | |
| HRGMv2_1796_CGC49 | CGCFAM_09863 | Yes | 9 | 1 |
Top CAZyme Families