dbCAN Logo

Cluster: HRGMv2_1796_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1796_9 HRGMv2_1796_9_74 81645 82940 + 2.A.1.6.7
pfam HRGMv2_1796_9 HRGMv2_1796_9_75 82992 83324 - YbfN
TC HRGMv2_1796_9 HRGMv2_1796_9_76 83374 84780 - 1.B.25.1.13
TF HRGMv2_1796_9 HRGMv2_1796_9_77 85417 86418 + LacI
CAZyme HRGMv2_1796_9 HRGMv2_1796_9_78 86453 88561 + CBM66
TC HRGMv2_1796_9 HRGMv2_1796_9_79 88595 89878 + 3.A.1.1.46
pfam HRGMv2_1796_9 HRGMv2_1796_9_80 89937 91604 - tRNA-synt_1c | tRNA-synt_1c_C | tRNA-synt_1c_C2
TC HRGMv2_1796_9 HRGMv2_1796_9_81 91792 93741 - 4.A.1.1.2
pfam HRGMv2_1796_9 HRGMv2_1796_9_82 94084 94884 + Glucosamine_iso
CAZyme HRGMv2_1796_9 HRGMv2_1796_9_83 94927 96093 + CE9
Gene ID: HRGMv2_1796_9_74
Type: TC
Location: 81645 - 82940 (+)
Gene ID: HRGMv2_1796_9_75
Type: pfam
Location: 82992 - 83324 (-)
Gene ID: HRGMv2_1796_9_76
Type: TC
Location: 83374 - 84780 (-)
Gene ID: HRGMv2_1796_9_77
Type: TF
Location: 85417 - 86418 (+)
Gene ID: HRGMv2_1796_9_78
Type: CAZyme
Location: 86453 - 88561 (+)
Gene ID: HRGMv2_1796_9_79
Type: TC
Location: 88595 - 89878 (+)
Gene ID: HRGMv2_1796_9_80
Type: pfam
Location: 89937 - 91604 (-)
Gene ID: HRGMv2_1796_9_81
Type: TC
Location: 91792 - 93741 (-)
Gene ID: HRGMv2_1796_9_82
Type: pfam
Location: 94084 - 94884 (+)
Gene ID: HRGMv2_1796_9_83
Type: CAZyme
Location: 94927 - 96093 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List